gaussian graphical models (ggms) Search Results


gaussian graphical models (ggm)  (Genenet Co Ltd)
90
Genenet Co Ltd gaussian graphical models (ggm)
Graphical <t>Gaussian</t> Model obtained considering the 30 highest partial correlation coefficients from the results of the GC-MS experiments on the lipid fraction to measure total fatty acid content . ( A ) The network calculated considering the fatty acid concentrations in all the strains. The network was also calculated considering wild type and fat-6 mutant ( B ) alone, and wild type and fat-7 mutant ( C ) alone. The straight lines represent positive partial correlation coefficients between the fatty acids, while dotted lines represent negative partial correlation coefficients. The intensity of the line is proportional to the intensity of the correlation.
Gaussian Graphical Models (Ggm), supplied by Genenet Co Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gaussian+graphical+models+(ggms)/graphical+gaussian+model/pmc03398271-227-21-26
Average 90 stars, based on 1 article reviews
gaussian graphical models (ggm) - by Bioz Stars, 2026-09
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bootnet package  (RStudio)
90
RStudio bootnet package
Graphical <t>Gaussian</t> Model obtained considering the 30 highest partial correlation coefficients from the results of the GC-MS experiments on the lipid fraction to measure total fatty acid content . ( A ) The network calculated considering the fatty acid concentrations in all the strains. The network was also calculated considering wild type and fat-6 mutant ( B ) alone, and wild type and fat-7 mutant ( C ) alone. The straight lines represent positive partial correlation coefficients between the fatty acids, while dotted lines represent negative partial correlation coefficients. The intensity of the line is proportional to the intensity of the correlation.
Bootnet Package, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gaussian+graphical+models+(ggms)/bootnet+package/10__1017_slash_s0954579422000463-147-17-22
Average 90 stars, based on 1 article reviews
bootnet package - by Bioz Stars, 2026-09
90/100 stars
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rstudio 4.2.2. software  (RStudio)
90
RStudio rstudio 4.2.2. software
Graphical <t>Gaussian</t> Model obtained considering the 30 highest partial correlation coefficients from the results of the GC-MS experiments on the lipid fraction to measure total fatty acid content . ( A ) The network calculated considering the fatty acid concentrations in all the strains. The network was also calculated considering wild type and fat-6 mutant ( B ) alone, and wild type and fat-7 mutant ( C ) alone. The straight lines represent positive partial correlation coefficients between the fatty acids, while dotted lines represent negative partial correlation coefficients. The intensity of the line is proportional to the intensity of the correlation.
Rstudio 4.2.2. Software, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gaussian+graphical+models+(ggms)/rstudio+version+1+3+1093/10__3390_slash_math11051168-117-9-9
Average 90 stars, based on 1 article reviews
rstudio 4.2.2. software - by Bioz Stars, 2026-09
90/100 stars
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r package v1.2.13  (Genenet Co Ltd)
90
Genenet Co Ltd r package v1.2.13
Graphical <t>Gaussian</t> Model obtained considering the 30 highest partial correlation coefficients from the results of the GC-MS experiments on the lipid fraction to measure total fatty acid content . ( A ) The network calculated considering the fatty acid concentrations in all the strains. The network was also calculated considering wild type and fat-6 mutant ( B ) alone, and wild type and fat-7 mutant ( C ) alone. The straight lines represent positive partial correlation coefficients between the fatty acids, while dotted lines represent negative partial correlation coefficients. The intensity of the line is proportional to the intensity of the correlation.
R Package V1.2.13, supplied by Genenet Co Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gaussian+graphical+models+(ggms)/r+package+v1+2+13/pmc06857226-482-14-12
Average 90 stars, based on 1 article reviews
r package v1.2.13 - by Bioz Stars, 2026-09
90/100 stars
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gaussian graphical models  (OpGen Inc)
90
OpGen Inc gaussian graphical models
Graphical <t>Gaussian</t> Model obtained considering the 30 highest partial correlation coefficients from the results of the GC-MS experiments on the lipid fraction to measure total fatty acid content . ( A ) The network calculated considering the fatty acid concentrations in all the strains. The network was also calculated considering wild type and fat-6 mutant ( B ) alone, and wild type and fat-7 mutant ( C ) alone. The straight lines represent positive partial correlation coefficients between the fatty acids, while dotted lines represent negative partial correlation coefficients. The intensity of the line is proportional to the intensity of the correlation.
Gaussian Graphical Models, supplied by OpGen Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gaussian+graphical+models+(ggms)/graphical+gaussian+models/pmc03476330-219-2-72
Average 90 stars, based on 1 article reviews
gaussian graphical models - by Bioz Stars, 2026-09
90/100 stars
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genenet software package  (Genenet Co Ltd)
90
Genenet Co Ltd genenet software package
Graphical <t>Gaussian</t> Model obtained considering the 30 highest partial correlation coefficients from the results of the GC-MS experiments on the lipid fraction to measure total fatty acid content . ( A ) The network calculated considering the fatty acid concentrations in all the strains. The network was also calculated considering wild type and fat-6 mutant ( B ) alone, and wild type and fat-7 mutant ( C ) alone. The straight lines represent positive partial correlation coefficients between the fatty acids, while dotted lines represent negative partial correlation coefficients. The intensity of the line is proportional to the intensity of the correlation.
Genenet Software Package, supplied by Genenet Co Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gaussian+graphical+models+(ggms)/genenet+r+package/pm22177423-443-21-21
Average 90 stars, based on 1 article reviews
genenet software package - by Bioz Stars, 2026-09
90/100 stars
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metacells  (MetaCell Inc)
90
MetaCell Inc metacells
Graphical <t>Gaussian</t> Model obtained considering the 30 highest partial correlation coefficients from the results of the GC-MS experiments on the lipid fraction to measure total fatty acid content . ( A ) The network calculated considering the fatty acid concentrations in all the strains. The network was also calculated considering wild type and fat-6 mutant ( B ) alone, and wild type and fat-7 mutant ( C ) alone. The straight lines represent positive partial correlation coefficients between the fatty acids, while dotted lines represent negative partial correlation coefficients. The intensity of the line is proportional to the intensity of the correlation.
Metacells, supplied by MetaCell Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gaussian+graphical+models+(ggms)/metacells/pmc11294836-54-13-22
Average 90 stars, based on 1 article reviews
metacells - by Bioz Stars, 2026-09
90/100 stars
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biovinci 1.1.5  (BioTuring Inc)
90
BioTuring Inc biovinci 1.1.5
Hierarchical clustering heat map, based on Spearman partial correlations of B vitamins and one-carbon metabolites with inflammation and angiogenesis biomarkers, adjusted for age group, patient sex, BMI category, cancer stage and site, physical activity, multivitamin intake and smoking status. Biomarkers involved in the same or similar pathways (such as pyridoxal (PL), pyridoxic acid (PA) and pyridoxal-5’-phosphate (PLP)) cluster together in the heat map. Blue indicates inverse correlations, for example, between PLP and C-reactive protein (CRP). Orange and red represent positive correlations, for example, between CRP and serum amyloid A (SAA). This heat map was created with <t>BioVinci</t> 1.1.5 (BioTuring Inc.). sICAM-1, soluble intercellular adhesion molecule 1; sVCAM-1, soluble vascular cell adhesion molecule 1; MCP-1, monocyte chemoattractant protein 1; TMP, thiamin monophosphate; Thi, thiamin; pABG, para-aminobenzoylglutamic acid; Ribo, riboflavin; apABG, acetyl-pABG; mTHF, 5-methyl-tetrahydrofolate; FA, folic acid; tHcy, total homocysteine; VEGF, vascular endothelial growth factor; Cob, cobalamin.
Biovinci 1.1.5, supplied by BioTuring Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gaussian+graphical+models+(ggms)/biovinci+1+1+5/pmc07425811-350-6-8
Average 90 stars, based on 1 article reviews
biovinci 1.1.5 - by Bioz Stars, 2026-09
90/100 stars
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electronic medical records  (Partners HealthCare System Inc)
90
Partners HealthCare System Inc electronic medical records
Hierarchical clustering heat map, based on Spearman partial correlations of B vitamins and one-carbon metabolites with inflammation and angiogenesis biomarkers, adjusted for age group, patient sex, BMI category, cancer stage and site, physical activity, multivitamin intake and smoking status. Biomarkers involved in the same or similar pathways (such as pyridoxal (PL), pyridoxic acid (PA) and pyridoxal-5’-phosphate (PLP)) cluster together in the heat map. Blue indicates inverse correlations, for example, between PLP and C-reactive protein (CRP). Orange and red represent positive correlations, for example, between CRP and serum amyloid A (SAA). This heat map was created with <t>BioVinci</t> 1.1.5 (BioTuring Inc.). sICAM-1, soluble intercellular adhesion molecule 1; sVCAM-1, soluble vascular cell adhesion molecule 1; MCP-1, monocyte chemoattractant protein 1; TMP, thiamin monophosphate; Thi, thiamin; pABG, para-aminobenzoylglutamic acid; Ribo, riboflavin; apABG, acetyl-pABG; mTHF, 5-methyl-tetrahydrofolate; FA, folic acid; tHcy, total homocysteine; VEGF, vascular endothelial growth factor; Cob, cobalamin.
Electronic Medical Records, supplied by Partners HealthCare System Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gaussian+graphical+models+(ggms)/electronic+medical+records/pm40089116-35-22-37
Average 90 stars, based on 1 article reviews
electronic medical records - by Bioz Stars, 2026-09
90/100 stars
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7 ethyl 10 hydroxycamptothecin tn true negative tp true positive probability distribution beta  (Biotechnology Information)
86
Biotechnology Information 7 ethyl 10 hydroxycamptothecin tn true negative tp true positive probability distribution beta
Hierarchical clustering heat map, based on Spearman partial correlations of B vitamins and one-carbon metabolites with inflammation and angiogenesis biomarkers, adjusted for age group, patient sex, BMI category, cancer stage and site, physical activity, multivitamin intake and smoking status. Biomarkers involved in the same or similar pathways (such as pyridoxal (PL), pyridoxic acid (PA) and pyridoxal-5’-phosphate (PLP)) cluster together in the heat map. Blue indicates inverse correlations, for example, between PLP and C-reactive protein (CRP). Orange and red represent positive correlations, for example, between CRP and serum amyloid A (SAA). This heat map was created with <t>BioVinci</t> 1.1.5 (BioTuring Inc.). sICAM-1, soluble intercellular adhesion molecule 1; sVCAM-1, soluble vascular cell adhesion molecule 1; MCP-1, monocyte chemoattractant protein 1; TMP, thiamin monophosphate; Thi, thiamin; pABG, para-aminobenzoylglutamic acid; Ribo, riboflavin; apABG, acetyl-pABG; mTHF, 5-methyl-tetrahydrofolate; FA, folic acid; tHcy, total homocysteine; VEGF, vascular endothelial growth factor; Cob, cobalamin.
7 Ethyl 10 Hydroxycamptothecin Tn True Negative Tp True Positive Probability Distribution Beta, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gaussian+graphical+models+(ggms)/ncbi+%D0%B1%D0%B0%D0%B7%D1%8B+%D0%B1%D0%B8%D0%BE%D0%B8%D0%BD%D1%84%D0%BE%D1%80%D0%BC%D0%B0%D1%86%D0%B8%D0%BE%D0%BD%D0%BD%D1%8B%D0%BC%D0%B8+%D0%B4%D0%B0%D0%BD%D0%BD%D1%8B%D1%85+%D0%BC%D0%B5%D1%82%D0%BE%D0%B4%D0%B0%D0%BC%D0%B8+%D0%BF%D0%BE%D0%BC%D0%BE%D1%89%D1%8C%D1%8E+%D1%81/yajima_masanao__2013__bayesian_modeling_of_interactions_in_structured_heterogeneous_data-1012-310-270
Average 86 stars, based on 1 article reviews
7 ethyl 10 hydroxycamptothecin tn true negative tp true positive probability distribution beta - by Bioz Stars, 2026-09
86/100 stars
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Image Search Results


Graphical Gaussian Model obtained considering the 30 highest partial correlation coefficients from the results of the GC-MS experiments on the lipid fraction to measure total fatty acid content . ( A ) The network calculated considering the fatty acid concentrations in all the strains. The network was also calculated considering wild type and fat-6 mutant ( B ) alone, and wild type and fat-7 mutant ( C ) alone. The straight lines represent positive partial correlation coefficients between the fatty acids, while dotted lines represent negative partial correlation coefficients. The intensity of the line is proportional to the intensity of the correlation.

Journal: BMC Genomics

Article Title: A metabolomic strategy defines the regulation of lipid content and global metabolism by Δ9 desaturases in Caenorhabditis elegans

doi: 10.1186/1471-2164-13-36

Figure Lengend Snippet: Graphical Gaussian Model obtained considering the 30 highest partial correlation coefficients from the results of the GC-MS experiments on the lipid fraction to measure total fatty acid content . ( A ) The network calculated considering the fatty acid concentrations in all the strains. The network was also calculated considering wild type and fat-6 mutant ( B ) alone, and wild type and fat-7 mutant ( C ) alone. The straight lines represent positive partial correlation coefficients between the fatty acids, while dotted lines represent negative partial correlation coefficients. The intensity of the line is proportional to the intensity of the correlation.

Article Snippet: The fatty acid peaks identified in the GC-FID chromatograms were normalised to the internal standard, imported into R and analysed by Gaussian Graphical Models (GGM), using GeneNet [[ ]; http://strimmerlab.org/software/genenet /].

Techniques: Gas Chromatography-Mass Spectrometry, Mutagenesis

Hierarchical clustering heat map, based on Spearman partial correlations of B vitamins and one-carbon metabolites with inflammation and angiogenesis biomarkers, adjusted for age group, patient sex, BMI category, cancer stage and site, physical activity, multivitamin intake and smoking status. Biomarkers involved in the same or similar pathways (such as pyridoxal (PL), pyridoxic acid (PA) and pyridoxal-5’-phosphate (PLP)) cluster together in the heat map. Blue indicates inverse correlations, for example, between PLP and C-reactive protein (CRP). Orange and red represent positive correlations, for example, between CRP and serum amyloid A (SAA). This heat map was created with BioVinci 1.1.5 (BioTuring Inc.). sICAM-1, soluble intercellular adhesion molecule 1; sVCAM-1, soluble vascular cell adhesion molecule 1; MCP-1, monocyte chemoattractant protein 1; TMP, thiamin monophosphate; Thi, thiamin; pABG, para-aminobenzoylglutamic acid; Ribo, riboflavin; apABG, acetyl-pABG; mTHF, 5-methyl-tetrahydrofolate; FA, folic acid; tHcy, total homocysteine; VEGF, vascular endothelial growth factor; Cob, cobalamin.

Journal: The British journal of nutrition

Article Title: One-carbon metabolites, B vitamins and associations with systemic inflammation and angiogenesis biomarkers among colorectal cancer patients: results from the ColoCare Study

doi: 10.1017/S0007114520000422

Figure Lengend Snippet: Hierarchical clustering heat map, based on Spearman partial correlations of B vitamins and one-carbon metabolites with inflammation and angiogenesis biomarkers, adjusted for age group, patient sex, BMI category, cancer stage and site, physical activity, multivitamin intake and smoking status. Biomarkers involved in the same or similar pathways (such as pyridoxal (PL), pyridoxic acid (PA) and pyridoxal-5’-phosphate (PLP)) cluster together in the heat map. Blue indicates inverse correlations, for example, between PLP and C-reactive protein (CRP). Orange and red represent positive correlations, for example, between CRP and serum amyloid A (SAA). This heat map was created with BioVinci 1.1.5 (BioTuring Inc.). sICAM-1, soluble intercellular adhesion molecule 1; sVCAM-1, soluble vascular cell adhesion molecule 1; MCP-1, monocyte chemoattractant protein 1; TMP, thiamin monophosphate; Thi, thiamin; pABG, para-aminobenzoylglutamic acid; Ribo, riboflavin; apABG, acetyl-pABG; mTHF, 5-methyl-tetrahydrofolate; FA, folic acid; tHcy, total homocysteine; VEGF, vascular endothelial growth factor; Cob, cobalamin.

Article Snippet: This heat map was created with BioVinci 1.1.5 (BioTuring Inc.). sICAM-1, soluble intercellular adhesion molecule 1; sVCAM-1, soluble vascular cell adhesion molecule 1; MCP-1, monocyte chemoattractant protein 1; TMP, thiamin monophosphate; Thi, thiamin; pABG, para-aminobenzoylglutamic acid; Ribo, riboflavin; apABG, acetyl-pABG; mTHF, 5-methyl-tetrahydrofolate; FA, folic acid; tHcy, total homocysteine; VEGF, vascular endothelial growth factor; Cob, cobalamin. fig ft0 fig mode=article f1 fig/graphic|fig/alternatives/graphic mode="anchored" m1 Open in a separate window Fig. 3. caption a7 Gaussian graphical model (GGM) of biomarker correlations, conditioned on the presence of all other biomarkers (conditional r ≥ |0·20|).

Techniques: Activity Assay